cg liftsample sampledir resultdir liftoverfile dbdir
Use liftover to convert the files from a sample (variant, region, ...) from one build to another
Converts a sample from one build to another (using liftover from ucsc). A liftover conversion is likely to cause loss of information: not all variants/regions can be properly converted. Variants that were dropped in the conversion, will be available in resultfile.unmapped.