GenomeComb

Genomecomb moved to github on https://github.com/derijkp/genomecomb with documentation on https://derijkp.github.io/genomecomb. For up to date versions, go there. These pages only remain here for the data on the older scientific application (or if someone really needs a long obsolete version of the software)

Regsubtract

Format

cg regsubtract region_file1 region_file2

Summary

subtract regions in region_file2 from region_file1

Description

Regions files are tab separated files that contain regions using the columns chromosome, begin, end. Regions must be sorted. A new region files containing only regions present in region_file1 and not in region_file2 will be written to stdout.

Arguments

region_file1
original regions file
region_file2
regions file to subtracted

Category

Regions