We have used GenomeComb to compare within-platform replicates (monozygotic twin genomes, Complete Genomics technology), and cross-platform replicates (Yoruban NA19240 sequenced using Illumina GAII and Complete Genomics). Extensive filter combinations were tested on these genome comparisons, and for each filter combination several metrics are reported:
Here you can choose which genomes to compare (i.e twins or NA19240), which which coverage stringency should be used (i.e. relaxed setting or minimal coverage depth of 10 versus stringent setting or minimak coverage depth of 20). After selecting the genomes to compare different filters can be applied manually, or certain predefined settings can be used.
To browse these results, first select which genomes you want to compare: