Genomecomb moved to github on https://github.com/derijkp/genomecomb
with documentation on https://derijkp.github.io/genomecomb.
For up to date versions, go there. These pages only remain here for the data on the older scientific
application (or if someone really needs a long obsolete version of the software)
qsub
Format
cg qsub ?options? cmd ...
Summary
submit a command to the cluster (grid engine).
Description
Convenience function to esily run a command as a job on a (grid
engine) cluster
Arguments
- cmd ...
- command (and parameters) to be executed
Options
- -o outputfile (-outputfile)
- Output of the command will be written to the given
outputfile. By default, the filename job_$name.out will be used
- -e errorfile (-errorfile)
- stderr output of the command will be written to the given
errorfile. By default, the filename job_$name.err will be used
- -name name
- specify name to job (default generated based on the command)
- -dqueue value
- (only for sge) Use this option if you want to run on another
queue than the default all.q
- -deps ids
- job will only run when the jobs in ids (a comma separated
list of job ids)
Category
Dev
