GenomeComb
Genomecomb moved to github on https://github.com/derijkp/genomecomb with documentation on https://derijkp.github.io/genomecomb. For up to date versions, go there. These pages only remain here for the data on the older scientific application (or if someone really needs a long obsolete version of the software)
cg regselect region_file1 region_file2 ?near?
select all regions or variants in region_file1 that overlap with regions in region_file2
Regions files are tab separated files that contain regions using the columns chromosome, begin, end. Regions must be sorted. regselect selects all regions or variants in region_file1 that overlap with regions in region_file2. The resulting regions files is written to stdout.
Regions