GenomeComb



Genomecomb moved to github on https://github.com/derijkp/genomecomb with documentation on https://derijkp.github.io/genomecomb. For up to date versions, go there. These pages only remain here for the data on the older scientific application (or if someone really needs a long obsolete version of the software)

viz

Format

cg viz tsvfile

Summary

grahical vizualization of tsv files (even very large ones) as table without loading everything into memory

Description

This command starts a GUI for browsing (large) tsv files. cg viz never loads the entire table into memory, allowing for browsing huge files with millions of lines. The file is indexed to provide fast random access. First access to a file is slow because the index has to made. Alternatively, the cg index command can be used to create the index beforehand

The table can be viewed and queried in various ways. Look in howto_view for some examples of what you can do in cg_viz (and how).

Arguments

tsvfile ...
tsvfile to display

Category

Query